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A species-specific dictionary mapping marker identifiers to standardized gene annotations, including gene symbols, aliases, and database identifiers. This dataset supports marker harmonization and identifier resolution within the celliverse framework.

Format

An object of class CelliVerse_Data, implemented as a named list with two elements:

human

A data frame with 20,887 rows and 6 variables:

Marker

Internal marker identifier

Symbol

Official gene symbol

Alias

Alternative gene symbols or aliases

Entrez

Entrez Gene identifier

Ensembl

Ensembl gene identifier

UniProt

UniProt protein identifier

mouse

A data frame with 4,779 rows and 6 variables:

Marker

Internal marker identifier

Symbol

Official gene symbol

Alias

Alternative gene symbols or aliases

Entrez

Entrez Gene identifier

Ensembl

Ensembl gene identifier

UniProt

UniProt protein identifier

Source

Integrated from public gene annotation resources including Ensembl, Entrez Gene, and UniProt.

Details

This dictionary is used to standardize marker gene identifiers across datasets and species, enabling consistent matching between user-provided markers and curated cell-type marker databases.

See also